Reduced (redundant or simplified) alphabets for proteins
How to define a custom reduced alphabet
The procedure is very simple:
Colors will be automatically assigned to each letter of the alphabet (this behavior can not be personalized at the moment)
- one letter must be used for each group of aminoacids
p.e.: letters A,R,C,T and D for 5 groups
- aminoacid in the serie "ARNDCEQGHILKMFPSTWYV" will be substitute by letters defining the group.
p.e: from ARNDCEQGHILKMFPSTWYV to TCDCTCDTRAACDRDTDRRA
- the resulting serie of letters will be used in the form.